PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.1058s0080.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family NAC
Protein Properties Length: 376aa    MW: 41923.6 Da    PI: 7.8013
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.1058s0080.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM170.84.2e-5391441128
                     NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 
                             lppGfrFhPtdeel+ +yL+kkv+++++++ ++i++vdiyk++PwdLp k++ +ekewyfFs+rd+ky++g r+nra++sgyWkatg
  SapurV1A.1058s0080.1.p   9 LPPGFRFHPTDEELILHYLRKKVASTPFPV-SIIADVDIYKFDPWDLPGKAALGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATG 94 
                             79****************************.89***************888899********************************* PP

                     NAM  88 kdkevlsk.........kgelvglkktLvfykgrapkgektdWvmheyrl 128
                             +dk ++++         ++e+vg+kk Lvfy+g+ pkg+ktdW+mheyrl
  SapurV1A.1058s0080.1.p  95 TDKIIMASaitpggvieGHENVGVKKALVFYRGKPPKGVKTDWIMHEYRL 144
                             *******99999988887888***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.48E-644176IPR003441NAC domain
PROSITE profilePS5100561.6379176IPR003441NAC domain
PfamPF023652.0E-2710144IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    Send to blast
MKNVQQSRLP PGFRFHPTDE ELILHYLRKK VASTPFPVSI IADVDIYKFD PWDLPGKAAL  60
GEKEWYFFSP RDRKYPNGAR PNRAAASGYW KATGTDKIIM ASAITPGGVI EGHENVGVKK  120
ALVFYRGKPP KGVKTDWIMH EYRLADTPTF SYIKPIKPKD SSMRLDDWVL CRIYKKAHSL  180
TSCARAEMSS EHEQEEEDEE QQLLAPEIPF PSLKSSPPMN NKCPLMSQKS CSFTNLLDAM  240
DYSLLSSFLA DTQFNPPGFE SNPAPGGGAA CQMEQPPFFC NSHIGGGGGG GGSSFFIQKL  300
PQLSTSVPGN MDNKLKRQLD EEMQQQQPSK KFMSSCSLTN TSNISTQTDM NQYNFLSQTF  360
LNQQLLLSPH LQFQG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A3e-71417912168NO APICAL MERISTEM PROTEIN
1ut4_B3e-71417912168NO APICAL MERISTEM PROTEIN
1ut7_A3e-71417912168NO APICAL MERISTEM PROTEIN
1ut7_B3e-71417912168NO APICAL MERISTEM PROTEIN
3swm_A4e-71417915171NAC domain-containing protein 19
3swm_B4e-71417915171NAC domain-containing protein 19
3swm_C4e-71417915171NAC domain-containing protein 19
3swm_D4e-71417915171NAC domain-containing protein 19
3swp_A4e-71417915171NAC domain-containing protein 19
3swp_B4e-71417915171NAC domain-containing protein 19
3swp_C4e-71417915171NAC domain-containing protein 19
3swp_D4e-71417915171NAC domain-containing protein 19
4dul_A3e-71417912168NAC domain-containing protein 19
4dul_B3e-71417912168NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00333DAPTransfer from AT3G04070Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010999473.10.0PREDICTED: NAC transcription factor 29-like
SwissprotQ8H4S45e-85NAC10_ORYSJ; NAC transcription factor ONAC010
TrEMBLB9IPL80.0B9IPL8_POPTR; Uncharacterized protein
STRINGPOPTR_0019s04690.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF66212750
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.11e-112NAC domain containing protein 47